Multi Locus Sequence Typing of Campylobacter

An MLST system has been developed in the laboratory of Dr. Martin Maiden, Peter Medawar Building for Pathogen Research, University of Oxford, in collaboration with Prof. F. J. Bolton and Prof. A. Fox of the Public Health Laboratory Service.

Preliminary findings and methods have been published.

Dingle, K.E., Colles, F.M., Wareing, D.R.A., Ure, R., Fox, A.J., Bolton, F.J., Bootsma, R.J.L., Willems, R., Urwin, R., Maiden, M.C.J.  Multilocus Sequence Typing System for Campylobacter jejuniJournal of Clinical Microbiology (2001) 39 (1), 14-23.

This project is funded by the UK Department for Environment, Food and Rural Affairs (DEFRA).

We are planning to develop an integrated system together with several other interested groups in the UK and elsewhere.

Information

Experimental Conditions

MLST

These protocols are for guidance only and you may need to optimise them for your particular laboratory.

porA (MOMP)

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Citing the database

The preferred format for citing this website in publications is:

This publication made use of the Campylobacter Multi Locus Sequence Typing website (http://pubmlst.org/ campylobacter/) developed by Keith Jolley and sited at the University of Oxford (Jolley & Maiden 2010, BMC Bioinformatics, 11:595). The development of this site has been funded by the Wellcome Trust.

Status

jejuni/coli

Sequence database
Sequences: 130049
Profiles (MLST): 5804
Last updated: 2012-05-17

Isolate database
Isolates: 18193
Last updated: 2012-05-21

Non-jejuni/coli

Sequence database
Sequences: 1653
Profiles:
C. concisus/curvus MLST: 77
C. helveticus MLST: 8
C. hyointestinalis MLST: 109
C. insulaenigrae MLST: 43
C. lanienae MLST: 69
C. lari MLST: 18
C. sputorum MLST: 16
C. upsaliensis MLST: 147

Isolate database
Isolates: 227
Last updated: 2011-11-11