Recent publications using MLST in Campylobacter research

The following is a list of recent publications that use or mention MLST in research on Campylobacter. The list is generated automatically and includes references published in the last two years.

Information is provided by the US National Library of Medicine (NLM) and PubMed.  Please see the NCBI Disclaimer and Copyright.

List generated: 2012-02-06.


Revez J, Hänninen ML. Lipooligosaccharide locus classes are associated with certain Campylobacter jejuni multilocus sequence types. Eur J Clin Microbiol Infect Dis 2012, [Epub ahead of print]:

Lévesque S, St-Pierre K, Frost E, Arbeit RD, Michaud S. USE OF AMPLIFIED-FRAGMENT LENGTH POLYMORPHISM TO STUDY THE ECOLOGY OF CAMPYLOBACTER JEJUNI IN ENVIRONMENTAL WATER AND TO PREDICT MULTI-LOCUS SEQUENCE TYPING CLONAL COMPLEXES. Appl Environ Microbiol 2012, [Epub ahead of print]:

Parsons BN, Porter CJ, Stavisky JH, Williams NJ, Birtles RJ, Miller WG, Hart CA, Gaskell RM, Dawson S. Multilocus sequence typing of human and canine C. upsaliensis isolates. Vet Microbiol 2012, [Epub ahead of print]:

Sippy R, Sandoval-Green CM, Sahin O, Plummer P, Fairbanks WS, Zhang Q, Blanchong JA. Occurrence and molecular analysis of Campylobacter in wildlife on livestock farms. Vet Microbiol 2011, [Epub ahead of print]:

Sahin O, Fitzgerald C, Stroika S, Zhao S, Sippy RJ, Kwan P, Plummer PJ, Han J, Yaeger MJ, Zhang Q. Molecular Evidence for Zoonotic Transmission of an Emergent Highly Pathogenic Campylobacter jejuni Clone in the United States. J Clin Microbiol 2011, [Epub ahead of print]:

Eberle KN, Kiess AS. Phenotypic and genotypic methods for typing Campylobacter jejuni and Campylobacter coli in poultry. Poult Sci 2012, 91:255-64

Taboada EN, Ross SL, Mutschall SK, Mackinnon JM, Roberts MJ, Buchanan CJ, Kruczkiewicz P, Jokinen CC, Thomas JE, Nash JH, Gannon VP, Marshall B, Pollari F, Clark CG. Development and validation of a Comparative Genomic Fingerprinting method for high-resolution genotyping of Campylobacter jejuni. J Clin Microbiol 2011, [Epub ahead of print]:

OMahony E, Buckley JF, Bolton D, Whyte P, Fanning S. Molecular Epidemiology of Campylobacter Isolates from Poultry Production Units in Southern Ireland. PLoS One 2011, 6:e28490

Clark CG, Taboada E, Grant CC, Blakeston C, Pollari F, Marshall B, Rahn K, Mackinnon J, Daignault D, Pillai D, Ng LK. Comparison of molecular typing methods useful for detecting clusters of Campylobacter jejuni and C. coli isolates through routine surveillance. J Clin Microbiol 2011, [Epub ahead of print]:

Gripp E, Hlahla D, Didelot X, Kops F, Maurischat S, Tedin K, Alter T, Ellerbroek L, Schreiber K, Schomburg D, Janssen T, Bartholomaus P, Hofreuter D, Woltemate S, Uhr M, Brenneke B, Gruening P, Gerlach G, Wieler L, Suerbaum S, Josenhans C. Closely related Campylobacter jejuni strains from different sources reveal a generalist rather than a specialist lifestyle. BMC Genomics 2011, 12:584

Sanad YM, Kassem II, Abley M, Gebreyes W, Lejeune JT, Rajashekara G. Genotypic and Phenotypic Properties of Cattle-Associated Campylobacter and Their Implications to Public Health in the USA. PLoS One 2011, 6:e25778

Revez J, Rossi M, Ellström P, de Haan C, Rautelin H, Hänninen ML. Finnish Campylobacter jejuni Strains of Multilocus Sequence Type ST-22 Complex Have Two Lineages with Different Characteristics. PLoS One 2011, 6:e26880

Niederer L, Kuhnert P, Egger R, Büttner S, Hächler H, Korczak BM. Genotypes and Antibiotic Resistances of Campylobacter jejuni and Campylobacter coli Isolates from Domestic and Travel-Associated Human Cases. Appl Environ Microbiol 2012, 78:288-91

Egger R, Korczak BM, Niederer L, Overesch G, Kuhnert P. Genotypes and antibiotic resistance of Campylobacter coli in fattening pigs. Vet Microbiol 2011, [Epub ahead of print]:

Sproston EL, Ogden ID, Macrae M, Dallas JF, Sheppard SK, Cody AJ, Colles FM, Wilson MJ, Forbes KJ, Strachan NJ. Temporal variation and host association in the campylobacter population in a longitudinal ruminant farm study. Appl Environ Microbiol 2011, 77:6579-86

Sheppard SK, Colles FM, McCarthy ND, Strachan NJ, Ogden ID, Forbes KJ, Dallas JF, Maiden MC. Niche segregation and genetic structure of Campylobacter jejuni populations from wild and agricultural host species. Mol Ecol 2011, 20:3484-90

Magnússon SH, Guðmundsdóttir S, Reynisson E, Rúnarsson AR, Harðardóttir H, Gunnarson E, Georgsson F, Reiersen J, Marteinsson VT. Comparison of Campylobacter jejuni isolates from human, food, veterinary and environmental sources in Iceland using PFGE, MLST and fla-SVR sequencing. J Appl Microbiol 2011, 111:971-81

Wang X, Zhao S, Harbottle H, Tran T, Blickenstaff K, Abbott J, Meng J. Antimicrobial Resistance and Molecular Subtyping of Campylobacter jejuni and Campylobacter coli from Retail Meats. J Food Prot 2011, 74:616-621

Jorgensen F, Ellis-Iversen J, Rushton S, Bull SA, Harris SA, Bryan SJ, Gonzalez A, Humphrey TJ. Influence of Season and Geography on Campylobacter jejuni and C. coli Subtypes in Housed Broiler Flocks Reared in Great Britain. Appl Environ Microbiol 2011, 77:3741-8

Hepworth PJ, Ashelford KE, Hinds J, Gould KA, Witney AA, Williams NJ, Leatherbarrow H, French NP, Birtles RJ, Mendonca C, Dorrell N, Wren BW, Wigley P, Hall N, Winstanley C. Genomic variations define divergence of water/wildlife-associated Campylobacter jejuni niche specialists from common clonal complexes. Environ Microbiol 2011, 13:1549-60

Lévesque S, Michaud S, Arbeit RD, Frost EH. High-resolution melting system to perform multilocus sequence typing of Campylobacter jejuni. PLoS One 2011, 6:e16167

Zautner AE, Herrmann S, Corso J, Tareen AM, Alter T, Groß U. Epidemiological Association of Different Campylobacter jejuni Groups with Metabolism-Associated Genetic Markers. Appl Environ Microbiol 2011, 77:2359-2365

Collado L, Figueras MJ. Taxonomy, epidemiology, and clinical relevance of the genus Arcobacter. Clin Microbiol Rev 2011, 24:174-92

Senior NJ, Bagnall MC, Champion OL, Reynolds SE, La Ragione RM, Woodward MJ, Salguero FJ, Titball RW. Galleria mellonella as an infection model for Campylobacter jejuni virulence. J Med Microbiol 2011, 60:661-9

Merga JY, Leatherbarrow AJ, Winstanley C, Bennett M, Hart CA, Miller WG, Williams NJ. Comparison of Arcobacter isolation methods, and diversity of Arcobacter spp. in Cheshire, United Kingdom. Appl Environ Microbiol 2011, 77:1646-50

Sheppard SK, Dallas JF, Wilson DJ, Strachan NJ, McCarthy ND, Jolley KA, Colles FM, Rotariu O, Ogden ID, Forbes KJ, Maiden MC. Evolution of an agriculture-associated disease causing Campylobacter coli clade: evidence from national surveillance data in Scotland. PLoS One 2010, 5:e15708

Pérez-Boto D, García-Pena FJ, Abad-Moreno JC, Hurtado-Pizarro MD, Pérez-Cobo I, Echeita MA. Drinking water as the source of Campylobacter coli infection in grandparent heavy breeders. Avian Pathol 2010, 39:483-7

Kittl S, Kuhnert P, Hächler H, Korczak BM. Comparison of genotypes and antibiotic resistance of Campylobacter jejuni isolated from humans and slaughtered chickens in Switzerland. J Appl Microbiol 2011, 110:513-520

Behringer M, Miller WG, Oyarzabal OA. Typing of Campylobacter jejuni and Campylobacter coli isolated from live broilers and retail broiler meat by flaA-RFLP, MLST, PFGE and REP-PCR. J Microbiol Methods 2011, 84:194-201

Thakur S, Gebreyes WA. Phenotypic and genotypic heterogeneity of Campylobacter coli within individual pigs at farm and slaughter in the US. Zoonoses Public Health 2010, 57 Suppl 1:100-6

Hastings R, Colles FM, McCarthy ND, Maiden MC, Sheppard SK. Campylobacter genotypes from poultry transportation crates indicate a source of contamination and transmission. J Appl Microbiol 2011, 110:266-76

Oporto B, Juste RA, López-Portolés JA, Hurtado A. Genetic Diversity among Campylobacter jejuni Isolates from Healthy Livestock and Their Links to Human Isolates in Spain. Zoonoses Public Health 2011, 58:365-75

Patriarchi A, Fox A, Maunsell B, Fanning S, Bolton D. Molecular characterization and environmental mapping of campylobacter isolates in a subset of intensive poultry flocks in ireland. Foodborne Pathog Dis 2011, 8:99-108

Williams NJ, Jones TR, Leatherbarrow HJ, Birtles RJ, Lahuerta-Marin A, Bennett M, Winstanley C. Isolation of a novel Campylobacter jejuni clone associated with the bank vole, Myodes glareolus. Appl Environ Microbiol 2010, 76:7318-21

Karagiannis I, Sideroglou T, Gkolfinopoulou K, Tsouri A, Lampousaki D, Velonakis EN, Scoulica EV, Mellou K, Panagiotopoulos T, Bonovas S. A waterborne Campylobacter jejuni outbreak on a Greek island. Epidemiol Infect 2010, 138:1726-34

Wright S, Wilson S, Miller WG, Mandrell RE, Siletzky RM, Kathariou S. Differences in methylation at GATC sites in genomic DNA of Campylobacter coli from turkeys and swine. Appl Environ Microbiol 2010, 76:7314-7

Teh KH, Flint S, French N. Biofilm formation by Campylobacter jejuni in controlled mixed-microbial populations. Int J Food Microbiol 2010, 143:118-24

Shin E, Lee Y. Characterization of erythromycin-resistant porcine isolates of Campylobacter coli. Microb Drug Resist 2010, 16:231-9

de Haan CP, Kivistö R, Hänninen ML. Association of Campylobacter jejuni Cj0859c gene (fspA) variants with different C. jejuni multilocus sequence types. Appl Environ Microbiol 2010, 76:6942-3

Wirz SE, Overesch G, Kuhnert P, Korczak BM. Genotype and antibiotic resistance analyses of Campylobacter isolates from ceca and carcasses of slaughtered broiler flocks. Appl Environ Microbiol 2010, 76:6377-86

de Haan CP, Kivistö RI, Hakkinen M, Corander J, Hänninen ML. Multilocus sequence types of Finnish bovine Campylobacter jejuni isolates and their attribution to human infections. BMC Microbiol 2010, 10:200

Zhang M, Gu Y, He L, Ran L, Xia S, Han X, Li H, Zhou H, Cui Z, Zhang J. Molecular typing and antimicrobial susceptibility profiles of Campylobacter jejuni isolates from north China. J Med Microbiol 2010, 59:1171-7

Habib I, Uyttendaele M, De Zutter L. Survival of poultry-derived Campylobacter jejuni of multilocus sequence type clonal complexes 21 and 45 under freeze, chill, oxidative, acid and heat stresses. Food Microbiol 2010, 27:829-34

Moffatt CR, Cameron S, Mickan L, Givney RC. Campylobacter jejuni gastroenteritis at an Australian boarding school: consistency between epidemiology, flaA typing, and multilocus sequence typing. Foodborne Pathog Dis 2010, 7:1285-90

Rotariu O, Smith-Palmer A, Cowden J, Bessell PR, Innocent GT, Reid SW, Matthews L, Dallas J, Ogden ID, Forbes KJ, Strachan NJ. Putative household outbreaks of campylobacteriosis typically comprise single MLST genotypes. Epidemiol Infect 2010, 138:1744-7

de Haan CP, Kivistö R, Hakkinen M, Rautelin H, Hänninen ML. Decreasing trend of overlapping multilocus sequence types between human and chicken Campylobacter jejuni isolates over a decade in Finland. Appl Environ Microbiol 2010, 76:5228-36

Yabe S, Higuchi W, Iwao Y, Takano T, Razvina O, Reva I, Nishiyama A, Yamamoto T. Molecular typing of Campylobacter jejuni and C. coli from chickens and patients with gastritis or Guillain-Barré syndrome based on multilocus sequence types and pulsed-field gel electrophoresis patterns. Microbiol Immunol 2010, 54:362-7

Sheppard SK, Colles F, Richardson J, Cody AJ, Elson R, Lawson A, Brick G, Meldrum R, Little CL, Owen RJ, Maiden MC, McCarthy ND. Host association of Campylobacter genotypes transcends geographic variation. Appl Environ Microbiol 2010, 76:5269-77

Xue F, Xu F, Luan J, Li Z, Zhu C, Jiang Y, Lu C. [Multilocus sequence typing of animal source Campylobacter jejuni in East China]. Wei Sheng Wu Xue Bao 2010, 50:298-303

Zhang M, Li Q, He L, Meng F, Gu Y, Zheng M, Gong Y, Wang P, Ruan F, Zhou L, Wu J, Chen L, Fitzgerald C, Zhang J. Association study between an outbreak of Guillain-Barre syndrome in Jilin, China, and preceding Campylobacter jejuni infection. Foodborne Pathog Dis 2010, 7:913-9

Sproston EL, Ogden ID, MacRae M, Forbes KJ, Dallas JF, Sheppard SK, Cody A, Colles F, Wilson MJ, Strachan NJ. Multi-locus sequence types of Campylobacter carried by flies and slugs acquired from local ruminant faeces. J Appl Microbiol 2010, 109:829-38

Stuart TL, Sandhu J, Stirling R, Corder J, Ellis A, Misa P, Goh S, Wong B, Martiquet P, Hoang L, Galanis E. Campylobacteriosis outbreak associated with ingestion of mud during a mountain bike race. Epidemiol Infect 2010, 138:1695-703

Gabriel E, Wilson DJ, Leatherbarrow AJ, Cheesbrough J, Gee S, Bolton E, Fox A, Fearnhead P, Hart CA, Diggle PJ. Spatio-temporal epidemiology of Campylobacter jejuni enteritis, in an area of Northwest England, 2000-2002. Epidemiol Infect 2010, 138:1384-90

Müllner P, Collins-Emerson JM, Midwinter AC, Carter P, Spencer SE, van der Logt P, Hathaway S, French NP. Molecular epidemiology of Campylobacter jejuni in a geographically isolated country with a uniquely structured poultry industry. Appl Environ Microbiol 2010, 76:2145-54

Mullner P, Shadbolt T, Collins-Emerson JM, Midwinter AC, Spencer SE, Marshall J, Carter PE, Campbell DM, Wilson DJ, Hathaway S, Pirie R, French NP. Molecular and spatial epidemiology of human campylobacteriosis: source association and genotype-related risk factors. Epidemiol Infect 2010, 138:1372-83

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Citing the database

The preferred format for citing this website in publications is:

This publication made use of the Campylobacter Multi Locus Sequence Typing website (http://pubmlst.org/ campylobacter/) developed by Keith Jolley and sited at the University of Oxford (Jolley & Maiden 2010, BMC Bioinformatics, 11:595). The development of this site has been funded by the Wellcome Trust.

Status

jejuni/coli

Sequence database
Sequences: 7983
Profiles (MLST): 5739
Last updated: 2012-01-30

Isolate database
Isolates: 16291
Last updated: 2012-02-06

Non-jejuni/coli

Sequence database
Sequences: 1653
Profiles:
C. concisus/curvus MLST: 77
C. helveticus MLST: 8
C. hyointestinalis MLST: 109
C. insulaenigrae MLST: 43
C. lanienae MLST: 69
C. lari MLST: 18
C. sputorum MLST: 16
C. upsaliensis MLST: 147

Isolate database
Isolates: 227
Last updated: 2011-11-11