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Flavobacterium psychrophilum MLST Databases

This site uses two linked databases powered by the BIGSdb genomics platform. The sequence definition database contains allele sequence and MLST profile definitions whereas the isolate database contains provenance and epidemiological information. Further details about BIGSdb can be found in Jolley & Maiden 2010, BMC Bioinformatics 11:595.

This MLST scheme was developed by Eric Duchaud and colleagues, Infection et Immunité des Poissons. Unité de Virologie et Immunologie Moléculaires, INRA, France.

Database curated by Eric Duchaud and Pierre Nicolas.

Citing the database

The preferred format for citing this website in publications is:

This publication made use of the Flavobacterium psychrophilum MLST website (http://pubmlst.org/ fpsychrophilum/) developed by Keith Jolley and sited at the University of Oxford (Jolley & Maiden 2010, BMC Bioinformatics, 11:595). The development of this site has been funded by the Wellcome Trust.


Sequence database
Sequences: 272
Profiles (MLST): 166
Last updated: 2013-12-23

Isolate database
Isolates: 995
Last updated: 2014-10-27