PubMLST Mirror Sites

In order to provide a robust service for the public health community, the PubMLST.org website and associated databases are mirrored. If the primary site is unavailable for any reason, the mirrors should remain available. In the future, we envisage a network of geographically-spread mirror sites.

The website and databases are synchronised every evening, so the mirror should be at most one day behind.

Our most recent mirror has been set up at the University of Pittsburgh, USA, usmirror1.pubmlst.org. We are grateful to Kathleen Shutt for setting this up and to Lee Harrison for agreeing to host the site.

List of mirrors

AddressCountryHosting organisationStatus
pubmlst.orgUK University of Oxford, UKPrimary site
ukmirror1.pubmlst.orgUK Health Protection Agency Bioinformatics Group, Central Public Health Laboratory, Colindale, London, UK (Jon Green)Full mirror
ukmirror2.pubmlst.orgUK University of Oxford, UKFull mirror
usmirror1.pubmlst.orgUSAUniversity of Pittsburgh, USA (Lee Harrison & Kathleen Shutt)Full mirror

If you are interested in hosting an official PubMLST.org mirror site, please take a look at the instructions for mirroring (PDF). We are particularly interested in setting up mirrors outside the UK.

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News

A MLST scheme for Chlamydiales species has been developed by Yvonne Pannekoek, Arie van der Ende and colleages at the Academic Medical Center (Amsterdam, The Netherlands) and is now available.

The Klebsiella pneumoniae database has moved to the Pasteur MLST site.

The MLST scheme for Arcobacter species is now available. This scheme was developed by William Miller (USDA).

Recent updates

2008-10-06
Neisseria: 2 STs, 2 isolates

2008-10-02
C. jejuni: 1 allele, 33 STs, 33 isolates
Neisseria: 5 alleles, 5 STs, 18 isolates
S. zooepidemicus: 14 isolates

2008-10-01
Neisseria: 6 STs, 1 isolate
P. aeruginosa: 16 alleles, 10 STs, 10 isolates
S. zooepidemicus: 1 allele, 1 ST

Database update activity