Plasmid MLST Databases

The Plasmid MLST website contains databases containing definitions for MLST of the I1, HI1, HI2, F and N incompatibility groups. This structure offers advantages over a single database system. Further details can be found here.

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IncI1, IncHI2, F and N schemes: developed by Aurora García-Fernández and Alessandra Carattoli, Istituto Superiore di Sanità, Rome, Italy (funded by the European Commission and the Italian Ministry of Research and University). Curated by Alessandra Carattoli.

IncHI1 scheme: developed by Minh-Duy Phan and John Wain when they were at The Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK. Curated by Minh-Duy Phan.

Website and database managed by Keith Jolley.

The use of this database is subject to the terms of the policy document and it should be acknowledged in all publications that make use of it. The preferred format for the acknowledgement can be found in the right-hand sidebar.

The primary plasmid MLST website is hosted at The Department of Zoology, University of Oxford, UK.

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A. baumannii
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Bordetella
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Citing the database

The preferred format for citing this website in publications is:

This publication made use of the plasmid MLST website (http://pubmlst.org/ plasmid/) developed by Keith Jolley and sited at the University of Oxford (Jolley & Maiden 2010, BMC Bioinformatics, 11:595). The development of this site has been funded by the Wellcome Trust.

Status

Sequence database
Sequences: 212
Profiles:
IncHI1 MLST: 8
IncHI2 DLST: 2
IncI1 MLST: 96
IncN MLST: 14

Isolate database
Isolates: 652
Last updated: 2012-02-03